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Publicaciones

            

Publicaciones / Selected Publications 
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Artículos en revistas de investigación acreditadas (JCR- Factor de impacto) / Articles in International Science Journals (JCR)

  • Murga-Moreno, J.; Coronado-Zamora, M.; Hervás, S.; Casillas, S & A. Barbadilla 2019. PopHumanScan: the online catalog of human genome adaptation. Nucleic Acids Research https://doi.org/10.1093/nar/gkz372

  • Coronado*, M, I. Salvador*, D. Castellano, A. Barbadilla & I. Salazar. 2019. Adaptation and conservation throughout the Drosophila melanogaster life-cycle. Genome, Biology and Evolution evz086, https://doi.org/10.1093/gbe/evz086.

  • Murga-Moreno, J.; Coronado-Zamora, M.; Bodelón, A.; Barbadilla, A. and Casillas, S  2019. PopHumanScan: the online catalog of human genome adaptation. Nucleic Acids Research, gky959, https://doi.org/10.1093/nar/gky959 

  • Casillas*, S., R. Mulet*, P. Villegas-Mirón, S. Hervás, E. Sanz, D. Velasco, J. Bertranpetit, H. Laayouni & A. Barbadilla. 2018. PopHuman: the human population genomics browser. Nucl. Acids Res. gkx943, https://doi.org/10.1093/nar/gkx943    * Equal contribution.  

  • Salvador*, I., M. Coronado*, D. Castellano, A. Barbadilla & I. Salazar. 2018. Mapping selection within Drosophila melanogaster embryo’s anatomy. Molecular Biology and Evolution https://doi.org/10.1093/molbev/msx266.
    * Equal contribution. 

  • S. Hervas, E. Sanz, S. Casillas, J. Pool and A. Barbadilla. 2017. PopFly: the Drosophila population genomics browser. Bioinformatics https://doi.org/10.1093/bioinformatics/btx301

  • Casillas, S. and A. Barbadilla. 2017. Molecular Population Genetics. Genetics 205: 1003–1035https://doi.org/10.1534/genetics.116.196493
  • Pavlidou, P.; A. Daponte, R. Egea, E. Dardiotis, G.M. Hadjigeorgiou, A. Barbadilla & T. Agorastos. 2016. Genetic polymorphisms of FAS and EVER genes in a Greek population and their susceptibility to cervical cancer: a case control study. BMC Cancer 2016 16:923.

  • Castellano, D., M. Coronado-Zamora, JL. Campos, A. Barbadilla, A. Eyre-Walker. 2016. Adaptive evolution is substantially impeded by Hill-Robertson interference in Drosophila. Mol Biol Evol (2016) 33 (2): 442-455.

  • Guillén, Y. et al. 2015. Genomics of ecological adaptation in cactophilic Drosophila. Genome Biol Evol (2015) (1):349-366.doi: 10.1093/gbe/evu291.

  • Huang, W. et al. 2014. Natural Variation in Genome Architecture. Among 205 Drosophila melanogaster Genetic Reference Panel Lines. Genome Research 2014. 24:1193-120.

  • A. Martínez-Fundichely, S. Casillas, R. Egea, M. Ràmia, A. Barbadilla, L. Pantano, M. Puig & M. Cáceres. 2014. InvFEST, a database integrating information of polymorphic inversions in the human genome. Nucl. Acids Res.42 (D1): D1027-D1032.doi: 10.1093/nar/gkt1122.

  • Gutiérrez F,M Gárriz,JM. Peri, L Ferraz,D Sol, JB Navarro, A Barbadilla, M Valdés. 2013. Fitness costs and benefits of personality disorder traits. Evolution and Human BehaviorFitness costs and benefits of personality disorder traits. Evolution and Human Behavior. Volume 34, Issue 1, January 2013, Pages 41–48.

  • T.F.C. Mackay*, S. Richards*, E.A. Stone*, A. Barbadilla*, ..., S. Casillas, M. Barrón, D. Castellano, P. Librado, M. Ràmia, J. Rozas et al. 2012. The Drosophila melanogaster Genetic Reference Panel: A Community Resource for Analysis of Population Genomics and Quantitative Traits. Nature 482: 173-178.
    * Equal contribution. 

  • Ràmia M, Librado P, Casillas S, Rozas, J & Barbadilla A. 2012. PopDrowser: The Population Drosophila Browser. Bioinformatics Feb 15;28(4):595-6.  

  • Miquel M, López-Ribera I, Ràmia M, Casillas S, Barbadilla A, Vicient CM. 2011. MASISH: a database for gene expression in maize seeds. Bioinformatics 27(3):435-436
  • Petit, N. and A. Barbadilla (2009). The efficiency of purifying selection in Mammals vs Drosophila metabolic genes. J. Evol. Biology 22: 2118-2124.

  • Petit, N. and A. Barbadilla (2009). Selection efficiency and effective population size in Drosophila species. J. Evol. Biology 22: 515-526. 

  • Egea, R., S. Casillas and A. Barbadilla (2008). Standard & Generalized McDonald and Kreitman test: a website to detect selection by comparing different classes of DNA sites. Nucleic Acids Res2008 July 1; 36 (Web Server issue): W157–W162.

  • Casillas, S., R. Egea, N. Petit, C. Bergman and A. Barbadilla (2007). Drosophila Polymorhism Database (DPDB): a portal for nucleotide polymorphism in Drosophila. Fly (4): 205-211.

  • Casillas, S., A. Barbadilla and C. Bergman (2007). Purifying selection maintains highly conserved noncoding sequences in Drosophila. Mol Biol Evol doi:10.1093/molbev/msm150.
     

  • Petit, N., S Casillas, A. Ruiz and A. Barbadilla  (2007). Protein polymorphism is negatively correlated with conservation of intronic sequences and complexity of expression patterns in Drosophila melanogaster. Journal of Molecular Evolution 64: 511-518. 
     

  • Egea, R, S. Casillas, E. Fernández, MA Senar & A. Barbadilla (2007). MamPol: a database of nucleotide polymorphism in the Mammalia class. Nucleic Acids Res2007 January; 35(Database issue): D624–D629 

  • Casillas, S, B Negre, A Barbadilla and A Ruiz (2006). Fast sequence evolution of Hox and Hox-derived genes in the genus Drosophila. BMC Evolutionary Biology 2006, 6:106 

  • Casillas, S & A. Barbadilla (2006). PDA v.2: improving the exploration and estimation of nucleotide polymorphism in large data sets of heterogeneous DNA. Nucl. Acids Res2006 34: W632-W634.
     

  • Casillas, S, N. Petit & A. Barbadilla (2005). DPDB: a database for the storage, representation and analysis of polymorphism in the Drosophila genus. Bioinformatics 2005 21: ii26-ii30; doi:10.1093/bioinformatics/bti1103
     

  • Bárbara Negre, Sònia Casillas, Magali Suzanne, Ernesto Sánchez-Herrero, Michael Akam, Michael Nefedov, Antonio Barbadilla, Pieter de Jong and Alfredo Ruiz (2005). Conservation of regulatory sequences and gene expression patterns in the disintegrating Drosophila Hox gene complex. Genome Research 15: 692-700, 2005
     

  • Casillas, S & A. Barbadilla (2004). PDA: a pipeline to explore and estimate polymorphism in large DNA databases. Nucleic Acid Research, Web Server issue 32: W166-W169

  • Casillas, S., N Petit, R Egea, A Barbadilla. 2004. Storage, Representation and Analysis of Nucleotide Polymorphism. Spanish Bioinformatics Conference, 137-141

  • Navarro, A. Barbadilla & A. Ruiz. (2000). Effect of inversion polymorphism on the neutral nucleotide variability of linked chromosomal regions. Genetics 155: 685-698.
     

  • Cáceres, M., J.M. Ranz, A. Barbadilla, M. Long & A. Ruiz. (1999). Generation of a widespread Drosophila inversion by a transposable element, Science 285: 415-418.
     

  • Cáceres, M., A. Barbadilla & A. Ruiz. (1999). Recombination rate predicts inversion size in Diptera», Genetics 153: 251-259.
     

  • Cáceres, M., A. Barbadilla & A. Ruiz. (1997). Inversion length and breakpoint distribution in the Drosophila buzzatii species complex: Is inversion length a selected trait?, Evolution 51: 1149-1155.
     

  • Betrán, E., J. Rozas, A. Navarro & A. Barbadilla. (1997). The estimation of the number and the distribution of gene conversion tracts from population DNA data», Genetics 146: 89-99.
     

  • Navarro, A., E. Betrán, A. Barbadilla & A. Ruiz. (1997). Recombination and gene flux caused by crossing over and gene conversion in inversion heterokaryotypes. Genetics 145: 281-295.

  • Ruiz A., J.M., Ranz, M. Caceres,  C. Segarra, A. Navarro & A. Barbadilla. (1997). Chromosomal evolution and comparative gene mapping in the Drosophila repleta species group. Genetics and Mol. Biol. 20: 553-565.

  • Barbadilla A, King LM, Lewontin RC. What does electrophoretic variation tell us about protein variation? Mol Biol Evol. 1996 Feb;13(2):427-32  

  • Ruiz, A. y A. Barbadilla. (1995). The contribution of quantitative trait loci and neutral marker loci to the genetic variances and covariances among quantitative traits in random mating populations», Genetics 139: 445-455.
     

  • Barbadilla, A. Ruiz, M. Santos & A. Fontdevila. (1994). Mating pattern and fitness component analysis associated with inversion polymorphism in a natural population of Drosophila buzzatii, Evolution 48: 767-780.
     

  • Naveira, H, & A. Barbadilla. (1992). The theoretical distribution of lengths of intact chromosome segments around a locus held heterozygous with backcrossing in a diploid species, Genetics 130: 205-209.
     

  • Barbadilla, A., H. Naveira, A. Ruiz & M. Santos. (1992).  The estimation of genotypic probabilities in an adult population by the analysis of descendants, Genetical Research 59: 131/137. 
     

  • Santos, M., A. Ruiz, J. E. Quezada Díaz, A. Barbadilla and A. Fontdevila. 1992. The evolutionary history of Drosophila buzzatii. XX. Positive phenotypic covariance between field adult fitness components and body size. Journal of Evolutionary Biology 5:403-422.
     

  • Ruiz, A., M. Santos, A. Barbadilla, J. E. Quezada-Díaz, E. Hasson & A. Fontdevila. (1991). Genetic variance for body size in a natural population of Drosophila buzzatii, Genetics 128: 739-750

  • Barbadilla, A. 1991. State of art of the problematic of higher taxa. Ameghiniana 28:295-301.

  • Barbadilla, A., J. E. Quezada Díaz, A. Ruiz, M. Santos and A. Fontdevila. 1991. The evolutionary history of Drosophila buzzatii. XVII. Double mating and sperm predominance. Genetics Selection Evolution 23:133 140. 
     

  • Santos, M., A. Ruiz, A. Barbadilla, J. E. Quezada Díaz, E. Hasson and A. Fontdevila. 1988. The evolutionary history of Drosophila buzzatii. XIV. Larger flies mate more often in nature. Heredity 61:255 262.
     

  • Barbadilla, A. & H. Naveira. (1988). «The estimation of parental genotypes by the analysis of a fixed number of their offspring.», Genetics 119: 465-472.




Artículos en libros / Books articles 

  • Berry, A. & A. Barbadilla. (2000). «Gene conversion is a major determinant of genetic diversity at the DNA level», en Evolutionary Genetics from Molecules to Morphology. R. S. Singh y C. B. Krimbras (eds.) Cambridge University Press, NY

  • A. Barbadilla (2009). "Darwinismo y Creacionismo". Cent cinquanta anys després de L’origen de les espècies de Darwin, (A. Navarro y C. Segarra eds.). Treballs de la Societat Catalana de Biologia, 60 (2009) 245-253.

  • A. Barbadilla (2008). "La recerca sobre el genoma humà". Enciclopèdia Catalana.

  • A. Barbadilla. (2003). "La Comunicación Social de la Ciencia e Internet" en La Ciencia es Cultura, págs. 177-180. Coordinador: Manuel Toharia, Edita: Soc. Gestión Museo de las Ciencias Príncipe Felipe de Valencia.

  • A. Barbadilla. (2000). "La selección natural: me replico, luego existo", en Evolución y filogenia de Artrópodos, pág. 605-612. SEA Vol. 26

  • A. Barbadilla. (1990). "La estructura de la Teoría de la Selección Natural", en Temas actuales de Biología Evolutiva, en A. Ruiz y M. Santos (Coordinadores), págs. 163-191. Publicaciones UAB, Barcelona.




Ensayos y artículos de Divulgación / Popular Science 

 

 

 



Web servers y bases de datos de diversidad genética / Bioinformatic databases and Web Servers  

  • Murga-Moreno, J.; Coronado-Zamora, M.; Bodelón, A.; Barbadilla, A. and Casillas, S. 2018. PopHumanScan: the online catalog of human genome adaptation. Dirección: http://pophumanscan.uab.cat

  • Casillas, S., R. Mulet, P. Villegas-Mirón, S. Hervás, E. Sanz, D. Velasco, J. Bertranpetit, H. Laayouni & A. Barbadilla. 2018. PopHuman: the human population genomics browser. Dirección: http://pophuman.uab.cat

  • PopFly: the Drosophila population genomics browser. S. Hervas, E. Sanz, S. Casillas, J. Pool and A. Barbadilla. 2017. Dirección: http://popfly.uab.cat 

  • PopDrowser: The Population Drosophila Browser. Ràmia M, Librado P, Casillas S, Rozas, J & Barbadilla A. 2012. Dirección: http://popdrowser.uab.cat

  • Standard & Generalized McDonald and Kreitman test: a website to detect selection by comparing different classes of DNA sites. Egea, R., S. Casillas and A. Barbadilla. 2008. Dirección: http://mkt.uab.cat 

  • PDA: pipeline para explorar y estimar el polimorfismo de grandes bases de DNA / PDA: a pipeline to explore and estimate polymorphism in large DNA databases - Casillas, S. & A. Barbadilla. 2004. PDA: Pipeline Diversity Analysis. Casillas, S. & A. Barbadilla. 2006. PDA v.2: improving the exploration and estimation of nucleotide polymorphism in large data sets of heterogeneous DNA. Dirección: http://pda.uab.es
  • MamPol: Mammalia Polymorphism Database. Drosophila Polymorphism Database. Plataforma de representación y análisis de la Diversidad Genética en Mamíferos / MamPol: Mammalia Polymorphism Database. Egea, R, S. Casillas, E. Fernández, MA Senar & A. Barbadilla (2006).  Dirección: http://mampol.uab.es/ 

  • Plataforma para la representación y análisis de la Diversidad Genética en Drosophila. Dirección: http://dpdb.uab.es  / DPDB: Drosophila Polymorphism Database. Casillas, S. & A. Barbadilla. 2005. 



Publicaciones en la Web / Internet Publications

  • Cursos / Courses

 

 

Presentación | Líneas Invest. | Proyectos | Publicaciones | Docencia | Conferencias | Otros méritos | 





Curriculum Vitae de Antonio Barbadilla

 


Recent research articles dealing with Population genetics or population genomics  (see complet list)

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Frequent intra- and inter-species introgression shapes the landscape of genetic variation in bread wheat.

Frequent intra- and inter-species introgression shapes the landscape of genetic variation in bread wheat.

Genome Biol. 2019 Jul 12;20(1):136

Authors: Cheng H, Liu J, Wen J, Nie X, Xu L, Chen N, Li Z, Wang Q, Zheng Z, Li M, Cui L, Liu Z, Bian J, Wang Z, Xu S, Yang Q, Appels R, Han D, Song W [+]



 

Query: Search (Population Genetics[Title/Abstract] OR Population Genomics[Title/Abstract] OR Genomic Variation[Title/Abstract] OR Genome variation[Title/Abstract]) AND ("Nature"[Journal] OR "Science)"[Journal] OR "Genetics"[Journal] OR "Genome research"[Journal] OR "Genome biology"[Journal] OR "Genome biology and evolution"[Journal] OR "Current genomics"[Journal] OR "Proceedings of the National Academy of Sciences of the United States of America"[Journal] OR "Molecular biology and evolution"[Journal])